The idea of this page is to collect links to materials that could be useful to vegetation ecologists for cleaning, organizing, analyzing, visualizing their data. The page is organized in blocks of (macro)topics. This initiative was established by the IAVS Ecoinformatics working group. If you want to add material, please, get in touch with the steering committee of the Ecoinformatics working group. Also, if you are a vegetation ecologist, consider joining the working group.
Disclaimer: this page is maintained by the Ecoinformatics working group. Please, let us know if a link is not working or if you want to add new material!
Ben Bolker’s page with FAQs about Generalized Linear Mixed-Effects Models
Statistical Rethinking by Richard McElreath. Bayesian stats.
R visualization workshop by Gert Stulp. A workshop to make graphs in R via ggplot2
A curated list of R packages for ecological niche modelling. A paper by Sillero et al.
Spatial ecology. Free & OpenSource BigGeoData Processing Tutorials
Code for An Introduction to Spatially-varying coefficient models in spOccupancy by Jeffrey W. Doser
The R crash course book. This is the repository for the book R Crash Course for Biologists.
Reproducibility. Reasons to work reproducibly.
Why don’t we share data and code? Perceived barriers and benefits to public archiving practices.